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Title: PROBING THE PAN-GENOME OF LISTERIA MONOCYTOGENES
Creator: Deng, Xiangyu
Date: 2011-04-26, 2011-05
Description: Bacterial pathogens often show significant intra-species variations in ecological fitness, host preference and pathogenic potential to cause...
Show moreBacterial pathogens often show significant intra-species variations in ecological fitness, host preference and pathogenic potential to cause infectious disease. The species of Listeria monocytogenes, a facultative intracellular pathogen and the causative agent of human listeriosis, consists of at least three distinct genetic lineages. Two of these lineages predominantly cause human sporadic and epidemic infections, whereas the third lineage has never been implicated in human disease outbreaks despite its overall conservation of many known virulence factors. The genomes of 26 L. monocytogenes strains representing the three lineages are compared based on both in silico comparative genomic analysis and high-density, pan-genomic DNA microarray hybridizations. We uncover 86 genes and 8 small regulatory RNAs that likely make L. monocytogenes lineages differ in carbohydrate utilization and stress resistance during their residence in natural habitats and passage through the host gastrointestinal tract. We also identify 2,330 to 2,456 core genes that define this species along with an open pan-genome pool that contains more than 4,052 genes. Phylogenomic reconstructions based on 3,560 homologous groups allowed robust estimation of phylogenetic relatedness among L. monocytogenes strains. The pan-genome approach enables accurate co-analysis of DNA sequence and hybridization array data for both core gene estimation and phylogenomic reconstruction. Application of our method to the pan-genome of L. monocytogenes sheds new insights into the intra-species genomic diversification, niche expansion and evolution of this important foodborne pathogen.
Ph.D. in Biology, May 2011
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Title: Green Building Design Concept & Integration (sequence unknown), IPRO 335 - Deliverables
Creator: Avanessian, Aris, Banda, Justine, Bergerson, Joshua, Burke, Jeffrey, Christo, Robert, Dexter, Eric, Kim, Kibum, Mey, Andrew, Okunaga, Jonathan, Razeq, Ali, Schaefer, Jacqueline, Thovar Leon, Adrian, Um, Hye
Date: 2009-12
Description: The scope of this IPRO project spans structural, architectural, foundation, HVAC, lighting and electric system designs, as well as building...
Show moreThe scope of this IPRO project spans structural, architectural, foundation, HVAC, lighting and electric system designs, as well as building cost estimating and professional ethics. The IPRO team will become informed about and apply principles associated with green design concepts, energy sustainability, post occupancy comfort, acoustic design issues, smart building concepts, health issues (abatement of mold- and allergy-causing agents), and safety considerations.
Deliverables for IPRO 335: Green Building Design Concept & Integration for the fall 2009 semester
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Title: High Performance Green Homes (sequence unknown), IPRO 317 - Deliverables: IPRO 317 Project Plan F09
Creator: Bhat, Adnan, Campbell, Brittanie, Cink, Jefferey, Gutstein, Yehuda, Hadi, Shuaib, Hafdi, Kamal, Hasan, Hasan, Kenig, Elezar, Lipski, Brian, Lollino, Luca, Margolis, Jordan, Nigamatzyanov, Tagir, Patel, Hiren, Patel, Neal, Shehada, Hazem, Toops, Melissa, Trauner, Crystal, Zgourdah, Mourad
Date: 2009-12
Description: The purpose of this project is to show how a team committed to helping people help save the world can leapfrog today's best designs. As...
Show moreThe purpose of this project is to show how a team committed to helping people help save the world can leapfrog today's best designs. As opposed to the tradition of minimum design standards that just meeting the building code, highest practical design standards are the focus. True sustainability is the goal of this project, including; Zero Carbon Emissions, Net Zero Energy, 100% Solar Power, 10 times the traditional design life, 1/10th the maintenance, rot proof, termite proof, fire proof, hurricane and earthquake resistant. The project team, using cutting edge technology, will develop all aspects of a start-up design and build company to promote High Performance Green Homes. This project will provide a great opportunity for IIT students to experience a challenging and interesting project and to significantly contribute to a better world.
Sponsorship: Jimmy Eng
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Title: OPTIMIZATION AND MARKET CLEARING IN THE POWER SYSTEMS WITH HIGH-LEVEL RENEWABLES
Creator: Ye, Hongxing
Date: 2016, 2016-05
Description: The increasing penetration of renewable energy source (RES), such as wind and solar power generation, in recent years to meet various...
Show moreThe increasing penetration of renewable energy source (RES), such as wind and solar power generation, in recent years to meet various renewable portfolio standards (RPS) has led to more uncertainties in power systems. The RES penetration level is expected to further increase in order to reduce emission and fight climate change. The growing uncertainties caused by RES pose new challenges in power and energy systems. Advanced models and technologies are urgent to provide secure, affordable and clean energy to customers. Security-Constrained Unit Commitment (SCUC) problem is one of the most important tools in the modern power system. It determines the optimal short-term generating planning. The electricity is priced and settled based on its solution. In order to manage the uncertainties caused by renewables, it is urgent to develop new SCUC models and solution approaches. SCUCs considering the uncertainties have become a focus of research in recent years. The proposed optimistic robust SCUC combines the idea of robust optimization and reserve concept in the electricity. The merit of the robust optimization is that its solution can be immunized against any uncertainties. It exactly meets the first priority, reliability, in power system operation. The robust optimization is attractive in theory. However, a solution is robust if and only if the system can survive in the worst case scenario. Hence, the key task is to identify the worst case scenario. Unfortunately, finding the worst case scenario in general is a non-deterministic polynomial-time hard (NP-hard) problem. This will create issue in satisfying the timeliness requirement that the optimal scheduling must be obtained quickly (e.g., within several hours) in the day-ahead electricity markets. This dissertation proposes a fast solution approach to finding the worst case scenario by exploring the special structure in the SCUC problem. This dissertation proposes a new market mechanism for managing uncertain ties caused by high-level RES based on the robust optimization. A new concept, Uncertainty Marginal Price (UMP), is proposed to charge uncertainty sources and to credit flexible sources. For the first time, explicit price signals are provided and utilized to manage any level uncertainties within a robust optimization framework. The proposed mechanism manages uncertainties from both the source side (uncertainty reduction) and resource side (uncertainty accommodation). In short term, it provides incentives for RES operators to improve forecasting accuracy (i.e. to reduce uncertainties) and existing flexible resources (e.g. storage) to participate the uncertainty accommodation. In long term, the proposed mechanism provides price signals for siting new flexible resources (e.g. energy storage) to accommodate uncertainties from increasing RES penetration.
Ph.D. in Electrical Engineering, May 2016
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Title: Developing a Collaborative On-line Student Research Forum (sequence unknown), IPRO 321 - Deliverables
Creator: Abhay, Anandha, Cornelius, Zachary, Corsus, Tom, De Courten-myers, Maximilian, Eberlin, Adam, Kapaldo, James, Nicholson, Bethany, Sizyuk, Yuriy, Sundberg, Stephen
Date: 2009-12
Description: ResearchWeb is meant to broaden IIT undergraduate participation beyond the existing mechanisms such as fellowships, research and reading...
Show moreResearchWeb is meant to broaden IIT undergraduate participation beyond the existing mechanisms such as fellowships, research and reading courses, and departmental projects. There is also the possibility of broadening this program to other scholarly individuals outside of the IIT undergraduate community. These individuals include IIT graduate students, students from other universities, and promising high school students. ResearchWeb is also meant to improve the transition, and perhaps promote if need be, the transition from undergraduate education to graduate education. This would be fulfilled through practical research experience.
Deliverables for IPRO 321:Developing a Collaborative On-line Student Research Forum for Fall 2009
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Title: Relationship of Executive Fuction Patterns and Academic Achievement Across DSM-IV Subtypes of Attention-Deficit/Hyperactivity Disorder
Creator: Young, Crystal
Date: 2012-07-18, 2012-07
Description: The aim of this study was to expand our understanding of the impact of executive function skills on academic achievement in children with ADHD...
Show moreThe aim of this study was to expand our understanding of the impact of executive function skills on academic achievement in children with ADHD, as well as investigate trends in executive functioning and academic achievement between ADHD subtypes in an adolescent sample. Each participant completed neuropsychological assessments including a measure of intelligence and academic functioning as well as several measures of executive functioning. Results suggested that children with ADHD – Combined Type do not significantly differ from children with ADHD – Inattentive Type on tasks of academic or executive functioning. Issues regarding outcomes associated with ADHD as well as diagnostic procedures are discussed.
Ph.D. in Psychology, July 2012
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Title: SUPERSONIC JET MIXING ENHANCEMENT USING IMPINGEMENT TONES FROM OBSTACLES OF VARIOUS GEOMETRIES
Creator: Raman, G, Rice, Ej
Date: 1995-03
Publisher: AMER INST AERONAUT ASTRONAUT
Description: This paper reports the results of an experiment that investigated the effect of impingement tones, generated by obstacles of various...
Show moreThis paper reports the results of an experiment that investigated the effect of impingement tones, generated by obstacles of various geometries, on the spreading of a supersonic jet flow. A rectangular supersonic jet was produced using a convergent-divergent nozzle that was operated near its design point (with shocks minimized). Immersing obstacles in the flow produced an intense impingement tone that then propagated upstream (as feedback) to the jet lip and excited the antisymmetric hydrodynamic mode in the jet, thus setting up a resonant self-sustaining loop. The violent flapping motion of the jet due to excitation of the antisymmetric mode, combined with the unsteady wakes of the obstacles, produced large changes in jet mixing. The experiment controlled the frequency and amplitude of the impingement tone excitation by varying the nozzle-to-obstacle distance and the obstacle immersion. Proper shaping of the obstacles made it possible to reduce the thrust penalty significantly.
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Title: SPATIO-TEMPORAL RECONSTRUCTION FOR GATED CARDIAC SPECT
Creator: Niu, Xiaofeng
Date: 2011-07, 2011-07
Description: In myocardial perfusion imaging using single photon emission computed tomography (SPECT), gated acquisition is often used in order to deal...
Show moreIn myocardial perfusion imaging using single photon emission computed tomography (SPECT), gated acquisition is often used in order to deal with blur caused by cardiac motion in the resulting images. While this can provide useful information about the myocardial function, it also inevitably leads to reduced signal-to-noise ratio in the acquired data due to gating. In this work, we aim to investigate and evaluate image reconstruction methods for improving the quality of the reconstructed images in cardiac gated SPECT imaging. First, we propose a spatio-temporal (aka 4D) reconstruction procedure for gated images based on use of discrete Fourier transform (DFT) basis functions, wherein the image activity at each spatial location is regulated by a Fourier representation along the gate dimension. The gated images are then reconstructed through determination of the coefficients of the Fourier representation. We explore two different reconstruction algorithms, one is a penalized least-square approach and the other is a maximum a posteriori approach. Our simulation results demonstrate that use of DFT-basis functions in gated imaging can improve the accuracy of the reconstruction. While in gated imaging the tracer distribution is traditionally treated as constant, a recent development is gated dynamic imaging where the goal is to obtain an image sequence from a single acquisition which shows simultaneously both cardiac motion and tracer distribution change over the course of imaging. In this work, we further develop and demonstrate a fully 5D (3D space plus time plus gate) reconstruction procedure for cardiac gated, dynamic SPECT imaging, where the challenge is even greater without the use of multiple fast camera rotations. We develop and compare two iterative reconstruction algorithms: one is based on the modified block sequential regularized EM (BSREM-II) algorithm, and the other is based on the Bsplines algorithm. Our simulation results demonstrate that the 5D reconstruction xiii procedure can yield gated dynamic images which show quantitative information for both perfusion defect detection and cardiac motion. Based upon the success of 5D reconstruction, we also study the saliency of 5D images for detection of perfusion defects. We explore efficient ways for characterization and visualization of information pertinent to perfusion defects in a 5D image sequence. We apply various metrics to quantify the degree to which perfusion deficits can be detected. We show that these metrics can be used to produce new types of visualizations, showing wall motion and perfusion information, that may potentially be useful for clinical evaluation. Finally, with the ultimate goal of effective detection of lesion defect for clinical use, we also investigate a direct reconstruction approach to determine a sequence of gated, kinetic parameter images from a single acquisition, which can provide information simultaneously for both tracer kinetics and wall motion. To combat the greatly under-determined nature of the problem, we apply smoothness constraints to exploit the similarity both among the different gates and among the local spatial neighborhood. The parameter images of the different gates are then determined jointly using maximum a posteriori estimation from all the available image data.
Ph.D. in Electrical Engineering, July 2011
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Title: EFFECT OF TEMPERATURE, MOISTURE CONTENT AND SOIL SURFACE AREA ON THE BIOLOGICAL DEGRADATION OF BIOSOLIDS ADDED TO SOIL
Creator: Wen, Dongqi
Date: 2016, 2016-05
Description: The objective is to develop and apply an organic matter degradation model (OMDM) that predicts changes in the biological degradation of...
Show moreThe objective is to develop and apply an organic matter degradation model (OMDM) that predicts changes in the biological degradation of organic matter added to soils as a function of soil temperature, moisture content and mineral surface area using data from field and laboratory measurements. A one year long laboratory study was conducted to determine biosolids microbial degradation rates (21 ˚C and 20% moisture content) for soils from eight different fields Biosolids microbial degradation rates were also determined for the eight soils under field condition (10 ˚C and 10% moisture content) by applying a degradation rate model (DRM). The total mineral surface areas for 27 soil samples were also determined. Regression analysis revealed that the degradation rate was positively associated with mineral soil surface area (R2=0.85) and that the biosolids application rate is not significantly associated with the biosolids degradation rate (p value =0.35>0.01). The OMDM determines a decomposition rate of 1.04 yr-1 at 30 ˚C, 20% moisture content, and 10 m2/g soil and provides correction factors for changes in soil temperature, moisture, and mineral surface area. The model predicted in changes of the biological degradation rate of biosolids added to soils with mineral surface areas that vary from 1 to 10 m2/g soil under laboratory and field conditions. A comparison of the measured and simulated degradation rates for eight different soils produced R2 = 0.87 for field data. The model was also able to predict the degradation rate of biosolids for 19 additional soils under field conditions (R2=0.89). The model was also applied to agricultural plant litter. The estimated degradation rates are 0.45 yr-1 corn stover, 0.35 yr-1 oats, 0.26 yr-1 wheat, and 0.13 yr-1 millet at 30 ˚C, 20% moisture content and 10 m2/g. This study demonstrates that the effects of environmental conditions and soil mineral surface area have a significant impact on degradation rates of organic matter and must be considered when assessing degradation rates for organic matter added to soil. Higher temperatures and moisture content and finer soils are related to larger degradation rates.
Ph.D. in Environmental Engineering, May 2016
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Title: Impacts of Sulfur Capture Technology in Coal Power Plants (sequence unknown), IPRO 302 - Deliverables: IPRO 302 Final Report F09
Creator: Contreras, Abraham, Dickman, Justin, Enadeghe, Gregory, Garcia Rodriguez, Hector, Haddad, Michael, Kyle, Ryan, Mongillo, Michael, Murphy, Ryan, Shonubi, Oluwaseun, Swillum, Bryce, Wolber, Brian, Worthon, Terrika
Date: 2009-12
Description: The IPRO team was investigating the net impact of sulfur capture technologies used in current and next generation power plants in the United...
Show moreThe IPRO team was investigating the net impact of sulfur capture technologies used in current and next generation power plants in the United States. It planned to use this knowledge to determine which sulfur capture technologies produce the greatest benefit for industry and society and to find the marketability of the sulfur byproducts created in these power plants.
Sponsorship: Sargent & Lundy, LLC
These are the deliverables for IPRO 302: Impacts of Sulfur Capture Technology in Coal Power Plants from the Fall 2009 semester.
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Title: INSTANTANEOUS DETECTION OF SPATIAL GRADIENT ERRORS IN DIFFERENTIAL GNSS
Creator: Jing, Jing
Date: 2014, 2014-12
Description: Differential GNSS (Global Navigation Satellite System) is currently being ex- tended using a high integrity Ground Based Augmentation System ...
Show moreDifferential GNSS (Global Navigation Satellite System) is currently being ex- tended using a high integrity Ground Based Augmentation System (GBAS) to enable civil aircraft precision approach and landing. Differential GPS carrier phase measure- ments between ground-based GBAS reference antennas can provide the means to de- tect and isolate certain signal-in-space (SIS) failures and anomalies that are hazardous to aircraft, most notably ionospheric anomalies and ephemeris failures, which can be characterized as spatial range error gradients. In this research, we develop a monitor capable of instantaneously detecting multi-dimensional spatial gradient faults. The existence of large gradients, while rare, has prompted the development of numerous ground monitors for their detection. One drawback of previously proposed monitors is that their performance for a given ground antenna con guration is de- pendent on how antennas are paired to form measurement differences. In contrast, in this work a new monitor approach is developed to provide consistent detection performance, regardless of how the antennas are paired, by combining measurements from multiple, spatially separated ground antennas through a null space transforma- tion. It is shown that the `null space' monitor signi cantly improves the detection performance over existing fault detection algorithms and enables GBAS to support Category III precision approach and landing. The instantaneous carrier phase monitor cannot detect all gradients due to the presence of integer cycle ambiguities. These ambiguities cannot be resolved because the gradient magnitude is unknown a priori. Furthermore, it has been shown that the performance of such monitors is highly dependent on the reference antenna topol- ogy. The range of detectable gradients for all carrier phase monitors depends on two factors: the number of antennas and their con guration. One can always expand the detection range by using many antennas, but only at greatly increased operational cost. Optimizing antenna con guration has been overlooked as a means to improve performance; simple, heuristic arguments typically prevail in the associated siting decisions. For example, when given four antennas it is generally assumed that they should be sited in a square arrangement to balance performance in all directions. However, such heuristics do not provide the maximum detectable range of gradients, and exploiting the freedom to choose the antenna topology can dramatically expand the detectable range. Due to the presence of carrier phase cycle ambiguities, the re- sulting optimization problem is a constrained, mixed integer nonlinear programming problem. By solving the nonlinear program, the optimal GBAS antenna topology that maximizes the range of detectable gradients can be found for any number of antennas. For ionospheric fronts, the magnitude of the resulting gradient is bounded. However, orbit ephemeris faults can be arbitrarily large. The monitor must be able to detect all large gradients. To detect gradients beyond the capability of the car- rier phase monitor, code phase measurements are integrated into the monitor. Al- though we show this allows for the detection of all gradients, the number and spacing of ground antennas may not be suitable for all ground stations. Therefore, dual frequency carrier phase measurements are also considered to reduce the number of antennas required to achieve the desired detection performance. Finally, a search algorithm is developed to nd the antenna topology that enables the null space mon- itor to detect all hazardous gradients using code and dual frequency carrier phase measurements.
Ph.D. in Mechanical and Aerospace Engineering, December 2014
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Title: Widget Applications to Enhance the Tru2Way Consumer Experience (sequence unknown), IPRO 312 - Deliverables: IPRO 312 IPRO Day Presentation F09
Creator: Alsharief, Yagoob, Aulfata, Muluken, Curtis, Christopher, Dhewaju, Anusuya, Mooney, Kevin, Mutyaba, Kevin, Ndoping, Marco, Onaissi, Samah, Peterson, Naomi, Siwek, Steven, Wallace, Sean, Yi, Won-jae
Date: 2009-12
Description: The IPRO teams objectives are to provide Comcast with feedback from an outside perspective, allowing them to see where their Tru2Way system...
Show moreThe IPRO teams objectives are to provide Comcast with feedback from an outside perspective, allowing them to see where their Tru2Way system needs additional attention or support.
Sponsorship: Comcast
Deliverables for IPRO 312: Widget Applications to Enhance the Tru2Way Consumer Experience for the fall 2009 semester
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Title: COMPUTATION AND ANALYSIS OF TUMOR GROWTH
Creator: Turian, Emma
Date: 2016, 2016-05
Description: The ability of tumors to metastasize is preceded by morphological instabilities such as chains or fingers that invade the host environment....
Show moreThe ability of tumors to metastasize is preceded by morphological instabilities such as chains or fingers that invade the host environment. Parameters that control tumor morphology may also contribute to its invasive ability. In this thesis, we investigate tumor growth using a two-phase Stokes model. We first examine the morphological changes using the surface energy of the tumor-host interface and investigate its nonlinear dynamics using a boundary integral method. In an effort to understand the interface stiffness, we then model the tumor-host interface as an elastic membrane governed by the Helfrich bending energy. Using an energy variation approach, we derive a modified Young-Laplace condition for the stress jump across the interface, and perform a linear stability analysis to evaluate the effects of viscosity, bending rigidity, and apoptosis on tumor morphology. Results show that increased bending rigidity versus mitosis rate contributes to a more stable growth. On the other hand, increased tumor viscosity or apoptosis may lead to an invasive fingering morphology. Comparison with experimental data on glioblastoma spheroids shows good agreement especially for tumors with high adhesion and low proliferation. Next, we evaluate tumor regression during cancer therapy by a combined modality involving chemotherapy and radiotherapy. The goal is to address the complexities of a vascular tumor (e.g. apoptosis and vascularization) during treatment. We introduce an apoptotic time delay and study its impact on tumor regression using numerical and asymptotic techniques. In particular, we implement the linear-quadratic model and identify two extreme sets of parameter data, namely the slow, and fast tumor response to therapy. Numerical simulations for the slow response set show good agreements with data representing non-small cell lung carcinoma. Using the evolution equation for tumor radius with time delay, we find that tumors with shorter time interval to the onset of apoptosis shrink faster.
Ph.D. in Applied Mathematics, May 2016
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Title: Monitoring of multivariable dynamic processes and sensor auditing
Creator: Negiz, A., Cinar, A.
Date: 1998-10
Publisher: ELSEVIER SCI LTD
Description: Industrial continuous processes are usually operated under closed-loop control, yielding process measurements that are autocorrelated, cross...
Show moreIndustrial continuous processes are usually operated under closed-loop control, yielding process measurements that are autocorrelated, cross correlated, and collinear. A statistical process monitoring (SPM) method based on state variables is introduced to monitor such processes. The statistical model that describes the in-control variability is based on a canonical variate (CV) state space model. The CV state variables are linear combinations of the past process measurements which explain the variability of the future measurements the most, and they are regarded as the principal dynamic dimensions. A T-2 statistic based on the CV state variables is utilized for developing the SPM procedure. The CV state variables are also used for monitoring sensor reliability. An experimental application to a high temperature short time (HTST) pasteurization process illustrates the proposed methodology.
Endnote format citation
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Title: Large Scale Integration of Sustainable Energy and Congestion Management in Western Interconnection
Creator: Aflaki Khosrosha, Kaveh
Date: 2012-07-12, 2012-07
Description: Large scale sustainable energy like wind and solar energy integration to the bulk grid could introduce inevitable challenges to regional...
Show moreLarge scale sustainable energy like wind and solar energy integration to the bulk grid could introduce inevitable challenges to regional transmission and generation systems. The most important challenges for transmission system are the congestion management and planning for transmission expansion to transfer the zero cost generated electricity. Another big challenge is competition of current fuel based generation units in the electricity market with zero cost sustainable energy. In this dissertation all these challenges identified and analyzed for large scale grid. This thesis brings a new method used to study transmission congestions in Western Interconnection of the United States. The process involved Security-Constrained Unit Commitment (SCUC) formulation applying its results for analysis of transmission congestion. This thesis also presents results and findings in simulation of the system operation in the Western Interconnection of the United States with the inclusion of large scale wind and solar energy integration for year 2030. High level of wind and solar energy with the forecasted wind and solar time series profiles were integrated to the Western Interconnection grid. Their impact on different existing types of generation plants is studied. The sensitivity of the fuel prices, wind turbine power output, load volatility and demand side management as well as carbon tax are analyzed in different possible scenarios. In order to incorporate large scale of sustainable energy into a bulk electricity grid footprint, planned transmission expansion showed need to take place. Transmission expansion reduces grid congestion and balances Locational Marginal Prices (LMP). This thesis explores the advancements in high-performance computing and visual analytics of economic-based transmission expansion in the Western Electricity Coordinating Council (WECC). This expansion is based on 2018 and 2029 forecasted data. It identifies transmission congestions and average of LMP for each area, and expands the transmission system while accommodating large scale wind and solar energy to achieve the Department of Energy’s renewable energy vision for year 2030. An iterative transmission expansion analysis, based on the average LMP for each area, is used to identify the minimum WECC transmission lines required. All results are visualized on the Geographical Information System (GIS) format map of North America.
Ph.D. in Electrical Engineering, July 2012
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Title: AXISYMMETRICAL JET FORCED BY FUNDAMENTAL AND SUBHARMONIC TONES
Creator: Raman, G, Rice, Ej
Date: 1991-07
Publisher: AMER INST AERONAUT ASTRONAUT
Description: A circular jet was excited simultaneously by two harmonically related tones. The results of this excitation on jet behavior are reported for...
Show moreA circular jet was excited simultaneously by two harmonically related tones. The results of this excitation on jet behavior are reported for three pairs of Strouhal numbers [St(D) = f*D/U(j) = 0.2 and 0.4, 0.3 and 0.6, 0.4 and 0.8]. For each case, the initial phase difference between the two tones was varied in steps of 45 deg for one full cycle, and the amplitude of the fundamental and subharmonic tones was varied independently over the range of 0.1-7.0% of the jet exit velocity. Several results of this study agreed with other published findings, such as a critical amplitude or the fundamental being required for subharmonic augmentation and the initial phase difference being critical in determining whether the subharmonic is augmented or suppressed. In addition, the detailed documentation or several aspects of this phenomenon, measured in the same experimental facility in a controlled manner, brought out two important points that had eluded previous researchers. First, at high levels of the fundamental and subharmonic forcing amplitudes, the subharmonic augmentation is independent of the initial phase difference. Second, two-frequency excitation is indeed more effective than single-frequency excitation in jet mixing enhancement. Higher spreading rates seem to go along with higher subharmonic levels.
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Title: CORROSION-RESISTANT ELECTRO-CATALYSTS AND SUPPORTS FOR ELECTROCHEMICAL ENERGY CONVERSION
Creator: Wang, Guanxiong
Date: 2016, 2016-12
Description: Polymer electrolyte fuel cells (PEFCs) convert chemical energy of fuels (eg. Hydrogen) directly to electrical energy with excellent power...
Show morePolymer electrolyte fuel cells (PEFCs) convert chemical energy of fuels (eg. Hydrogen) directly to electrical energy with excellent power density, high efficiency, and zero emissions. Several challenges have delayed the commercialization of fuel cells with one being the high cost and durability of the carbon-supported-platinum-based (Pt/C) electrocatalysts. The lifetime/durability issue is critical as insufficient durability/reliability of the catalysts affects the lifetime and economical viability of these devices. Carbon support corrosion is a major durability issue since the corrosion reaction is thermodynamically favorable but kinetically sluggish under normal operating conditions. The potential transients that occur during start and stop in automotive applications can lead to electrode potential excursions of up to 1.5 V and contribute to carbon corrosion. The best way to mitigate support corrosion in PEFCs is to replace the carbon supports with alternatives having high electronic conductivity, surface area and porosity. This dissertation investigates the following carbon alternatives: (i) tin doped indium oxide (ITO) and (ii) 1:1 mixed oxides of ruthenia and silica (RSO). Microstructure characterization and electrochemical evaluations, including accelerated stress tests (start-up/shut-down and load cycling protocols) were performed to evaluate ORR activity, fuel cell performance, and electrochemical stability under PEFC operating conditions. The ITO support and 40%Pt/ITO catalysts demonstrated exceptional electrochemical stability (and reasonable ORR activity) in rotating disk electrode (RDE) experiments under accelerated potential cycling that mimicked automotive drive cycles. However, Pt/ITO exhibited poor performance and stability during MEA evaluation in a PEFC. X-ray photoelectron spectroscopy (XPS) was employed to reveal the degradation modes of Pt/ITO during PEFC operation and it was found that the increase in the surface hydroxide concentration generates a passivating In(OH)3 layer that increases electrode resistance and undermines PEFC performance. The influence of the catalyst support on PEM degradation during PEFC operation was also studied. Rotating ring-disk electrode (RRDE) experiments were employed to estimate the fraction of H2O2 generated during the ORR on the supports (C and RSO) and catalysts (benchmark Pt/C and Pt/RSO). The percentage of H2O2 generated on C and Pt/C was 50% higher than that on RSO and Pt/RSO thus explaining the observed oxidative degradation resistance of the PEM with the latter supports/catalysts.
Ph.D. in Chemical Engineering, December 2016
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Title: A modular simulation package for fed-batch fermentation: penicillin production
Creator: Birol, G., Undey, C., Cinar, A.
Date: 2002-11-15
Publisher: PERGAMON-ELSEVIER SCIENCE LTD
Description: Simulation software based on a detailed unstructured model for penicillin production in a fed-batch fermentor has been developed. The model...
Show moreSimulation software based on a detailed unstructured model for penicillin production in a fed-batch fermentor has been developed. The model extends the mechanistic model of Bajpai and Reuss by adding input variables such as pH, temperature, aeration rate, agitation power, and feed flow rate of substrate and introducing the CO2 evolution term. The simulation package was then used for monitoring and fault diagnosis of a typical penicillin fermentation process. The simulator developed may be used for both research and educational purposes and is available at the web site: http://www.chee.iit.edu/ similar to control/software.html.
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Title: AUTOMATIC SUMMARIZATION OF CLINICAL ABSTRACTS FOR EVIDENCE-BASED MEDICINE
Creator: Summerscales, Rodney L.
Date: 2013, 2013-12
Description: The practice of evidence-based medicine (EBM) encourages health professionals to make informed treatment decisions based on a careful analysis...
Show moreThe practice of evidence-based medicine (EBM) encourages health professionals to make informed treatment decisions based on a careful analysis of current research. However, after caring for their patients, medical practitioners have little time to spend reading even a small fraction of the rapidly growing body of medical research literature. As a result, physicians must often rely on potentially outdated knowledge acquired in medical school. Systematic reviews of the literature exist for speci c clinical questions, but these must be manually created and updated as new research is published. Abstracts from well-written clinical research papers contain key information regarding the design and results of clinical trials. Unfortunately, the free text nature of abstracts makes it di cult for computer systems to use and time consuming for humans to read. I present a software system that reads abstracts from randomized controlled trials, extracts key clinical entities, computes the e ectiveness of the proposed interventions and compiles this information into machine readable and human readable summaries. This system uses machine learning and natural language processing techniques to extract the key clinical information describing the trial and its results. It extracts the names and sizes of treatment groups, population demographics, outcome measured in the trial and outcome results for each treatment group. Using the extracted outcome measurements, the system calculates key summary measures used by physicians when evaluating the e ectiveness of treatments. It computes absolute risk reduction (ARR) and number needed to treat (NNT) values complete with con dence intervals. The extracted information and computed statistics are automatically compiled into XML and HTML summaries that describe the details and results of the trial. xiii Extracting the necessary information needed to calculate these measures is not trivial. While there have been various approaches to generating summaries of medical research, this work has mostly focused on extracting trial characteristics (e.g. population demographics, intervention/outcome information). No one has attempted to extract all of the information needed, nor has anyone attempted to solve many of the tasks needed to reliably calculate the summary statistics.
PH.D in Computer Science, December 2013
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Title: OIL RECOVERY IN SINGLE CAPILLARIES AND POROUS MEDIA USING WETTING NANOFLUIDS
Creator: Zhang, Hua
Date: 2016, 2016-05
Description: Recent experiments and modeling conducted in our laboratory have demonstrated that the spreading of nanofluids, liquid suspensions of...
Show moreRecent experiments and modeling conducted in our laboratory have demonstrated that the spreading of nanofluids, liquid suspensions of nanosized particles, on solids are enhanced due to self-structuring of nanoparticles in the confined three-phase oil-nanofluid-solid contact region. Nanofluids have recently been proposed as agents for enhanced oil recovery (EOR). Despite recently widely conducted research using nanofluids for EOR, the underlying operating mechanism is not well understood. In this thesis, we attempt to understand the mechanism of nanofluid based EOR and evaluate its performance from reservoir core samples and model systems (glass capillary and sintered bead-pack). To visualize how oil displacement in the rock pores by nanofluid, we conducted model study using hexadecane and single glass capillary and showed the oil film dynamics in air and nanofluid after oil was displaced in the capillary. Based on the understanding of the role of nanofluid on oil displacement in capillaries, we conducted imbibition tests using Berea sandstones and flooding experiments in sintered glass-beads. X-ray microtomography was used to visualize and analyze fluid distribution and to see the effect of nanofluid in EOR. We finally considered fractured media by fabricating such structures. The dynamics of a cylindrical hexadecane layer deposited inside glass capillaries after the oil/air displacement was studied experimentally and by modeling. The oil layer subject to surface perturbation becomes unstable forming uniform, regularly-spaced double concave menisci across the capillary that are bridged with dimples (collars). In order to reveal the phenomena of the film thinning and stability between the double concave meniscus and the dimple, we monitored an air bubble approaching a flat glass surface in hexadecane. We found that the oil film thinning in a cylindrical glass capillary and on a flat glass substrate were similar; We adapted the model proposed by Gauglitz and Radke for our system (oil-air displacement) and solved it numerically. The numerical result shows a stable film between the liquid bridge and the dimple, which is consistent with our experimental observations. We also estimated the meniscus-film-dimple thickness profile and found it was in fair agreement with the model prediction. The dynamics of cylindrical hexadecane film after displacement by a nanofluid in a glass capillary was studied. We found the thick hexadecane film is unstable, and over time it breaks and forms a thin film. Once the thick film ruptures, it retracts and forms an annular rim (liquid ridge) that collects liquid. As the volume of the annular rim increases over time, it forms a double concave meniscus across the capillary and dewetting stops. The thin film on the right side of the double concave meniscus then breaks and the contact angle increases. The process repeats until droplets build along the capillary wall. Finally, the droplets are displaced from the capillary wall by the nanofluid and spherical droplets appear inside the capillary. This is a novel phenomenon not observed during dewetting by a solution without nanoparticles. The theoretical model based on the lubrication approximation using the capillary pressure gradient was developed to estimate the annular rim dewetting velocity. The predicted dewetting velocity is found to be in fair agreement with the experimental value. We conducted imbibition tests using a reservoir crude oil and a reservoir brine solution with a high salinity and a suitable nanofluid that displaces crude oil from Berea sandstone and single glass capillaries. We present visual evidence of the underlying mechanism based on the structural disjoining pressure for the crude oil displacement using a polymeric nanofluid (our definition of such a fluid means a suspension of polymeric particles in an aqueous substrate) in high salinity brine. The polymeric nanofluid is specially formulated to survive in a high salinity environment and is found to result in an increased efficiency of 50% for Berea sandstone compared to 17% using the brine alone at a reservoir temperature of 55 oC. These results aid our understanding of the role of the nanofluid in displacing crude oil from the rock especially in a high salinity environment containing Ca++ and Mg++ ions. Results are also reported using Berea sandstone and a nanofluid containing silica nanoparticles. We conducted a series of flooding experiments at different capillary numbers to quantify the performance of a polymeric nanofluid compared to brine using the sintered glass-beads. A high resolution X-ray microtomography (microCT) was used to visualize oil and brine distribution in a sintered bead-pack before and after nanofluid flooding. The results of flooding experiments showed that an additional oil recovery of approximately 15% is possible with nanofluids compared to brine at low capillary numbers, and is as effective as high capillary number brine flooding. Nanofluid induced additional oil recovery decreases as we increase the capillary number and the total oil recovered shows a marginal decrease. At first glance, these results are opposite of what one expects in the conventional EOR, where oil recovery is known to increase progressively with increasing capillary number. These results cannot be explained based on mobilization theories due to the reduced capillarity. Our results however are consistent with the mechanism of wettability alteration caused by structural disjoining pressure leading to the formation of the wetting nanofluid film between oil and substrate.We presented experimental studies of nanofluid flooding in fractured porous media formed with sintered glass-beads. The nanofluid injection is conducted at a rate where structural disjoining pressure driven recovery is operational. We found an additional 23.8% oil can be displaced using nanofluid after brine injection with an overall displacement efficiency of 90.4% provided the matrix was in its native wettability state. In summary, nanofluids are excellent EOR agents and their economic viability needs to be examined.
Ph.D. in Chemical Engineering, May 2016
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