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Title: SURVIVAL OF SALMONELLA ON CHAMOMILE, PEPPERMINT AND GREEN TEA DURING STORAGE RELATED TO TEMPERATURE AND HUMIDITY
Creator: Chen, Zhengzai
Date: 2013-04-24, 2013-05
Description: Botanical/herbal teas may contain antimicrobial compounds that will affect the survival and persistence of the native as well as contaminant...
Show moreBotanical/herbal teas may contain antimicrobial compounds that will affect the survival and persistence of the native as well as contaminant microflora. Although Salmonella are known for their ability to survive in low water activity environments, their survival on dry botanical/herbal teas has not been examined. The purpose of this work is to determine the survival of Salmonella on three types of teas, chamomile peppermint, and green tea under different storage conditions. In addition, the ability of Salmonella to grow in tea brewed with contaminated product was examined. A cocktail of four Salmonella serovars was inoculated onto 1 g samples of chamomile, peppermint, and green tea to give a starting cell population of approximately 10 log cfu/g. The inoculum was allowed to dry prior to storage at 25 °C and 35 °C and at low (<30% RH) and high (> 90% RH) humidity levels. At different time intervals up to 6 months, triplicate samples at each condition were evaluated for surviving Salmonella populations. In addition, samples were used to produce a low-temperature (sun) brewed tea and inoculated. Growth was assessed after 24 hr. Under the four storage conditions tested, survival followed the order 25°C/low RH > 35°C/low RH > 25°C/high RH > 35°C/high RH. Salmonella losses at 25°C/low RH occurred primarily during drying, after which populations showed little declines over 6 months. In contrast Salmonella decreased below detection after 45 days at 35°C and high RH in all teas tested. All teas tested supported the growth of Salmonella after brewing. Storage conditions significantly impact the survival of Salmonella in dried herbal teas. If Salmonella survives after storage, it may also survive and grow after a home brewing process.
M.S. in Food Safety and Technology, May 2013
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Title: IN VITRO STUDIES OF VIRULENCE SUPPRESSION ON P. AERUGINOSA BY PHOSPHATE / POLYPHOSPHATE-LOADED NANOPARTICLES
Creator: Yin, Yushu
Date: 2015, 2015-07
Description: Critically ill patients harbor multi-drug resistant pathogens that can activate their virulence in the response to low nutrient conditions and...
Show moreCritically ill patients harbor multi-drug resistant pathogens that can activate their virulence in the response to low nutrient conditions and host stress derived factors. It was recently shown that the oversupply of inorganic phosphate to bacterial environment can profoundly suppress the virulence of pathogens. Here we hypothesized that phosphateand/ or polyphosphate-loaded nanoparticles can present a tool to deliver and slowly release phosphate in pathogen-rich niche, thereby suppressing bacterial virulence. In this work, a designed study on effect of different phosphate levels (including the phosphate released from hydrogel nanoparticles) on virulence of P. aeruginosa is addressed. In this work, we developed formulations for preparing hexametaphosphate-loaded nanoparticles on the basis of that for phosphate loaded nanoparticles. We utilized inverse miniemulsion polymerization in the synthesis of these nanoparticles. Polyethylene glycol diacrylate (PEGDA, moleculat weight of 575 Da) and N-vinyl pyrrolidone (molecular weight: 111.14 Da ) were chosen to be the initial monomers because the main crosslinker, polyethylene glycol is a kind of biocompatible material that has been approved by the U.S. Food and Drug Administration (FDA). Several parameter could be adjusted among the experiment. We selected the monomer mole fraction of PEGDA-575 as our parameter. After the synthesis, a nanoparticle size distribution between 110 nm and 150 nm was obtained. And these nanoparticles were proved to be able to release phosphate and hexametaphosphate as drug molecules. Although there were release bursts in the test of release kinetics, the crosslink density could be adjusted in following researches. The second part of this study is to test the virulence suppression effect of the nanoparticles in in vitro experiment on a kind of opportunistic pathogen, P. aeruginosa. This kind of gram-negative bacteria is one of the common intestinal microbial communities. We presented the strategy of suppressing virulence while containing rather than killing the bacteria. As a result, polyphosphate loaded nanoparticles showed to be the most effective one among several experiment groups. This result gave this study a promising future in further research in several aspects, such as in vivo test in biomedical and biomedical engineering.
M.S. in Chemical Engineering, July 2015
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Title: Impacts of Sulfur Capture Technology in Coal Power Plants (sequence unknown), IPRO 302 - Deliverables: IPRO_302_Project_Plan_final
Creator: Contreras, Abraham, Dickman, Justin, Enadeghe, Gregory, Garcia Rodriguez, Hector, Haddad, Michael, Kyle, Ryan, Mongillo, Michael, Murphy, Ryan, Shonubi, Oluwaseun, Swillum, Bryce, Wolber, Brian, Worthon, Terrika
Date: 2009-12
Description: The IPRO team was investigating the net impact of sulfur capture technologies used in current and next generation power plants in the United...
Show moreThe IPRO team was investigating the net impact of sulfur capture technologies used in current and next generation power plants in the United States. It planned to use this knowledge to determine which sulfur capture technologies produce the greatest benefit for industry and society and to find the marketability of the sulfur byproducts created in these power plants.
Sponsorship: Sargent & Lundy, LLC
These are the deliverables for IPRO 302: Impacts of Sulfur Capture Technology in Coal Power Plants from the Fall 2009 semester.
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Title: Transients on transmission lines and modern protective devices
Creator: Muelleman, Joseph P., Smely, James
Date: 2009, 1920
Publisher: Armour Institute of Technology
Description: http://www.archive.org/details/transientsontran00muel
Thesis (B.S.)--Armour Institute of Technology

Title: EBSD CHARACTERIZATION OF LOW TEMPERATURE DEFORMATION MECHANISMS IN MODERN ALLOYS
Creator: Kozmel, Thomas S Ii
Date: 2015, 2015-05
Description: For structural applications, grain re nement has been shown to enhance mechanical properties such as strength, fatigue resistance, and...
Show moreFor structural applications, grain re nement has been shown to enhance mechanical properties such as strength, fatigue resistance, and fracture toughness. Through control of the thermo-mechanical processing parameters, dynamic recrystallization mechanisms were used to produce microstructures consisting of sub-micron grains in 9310 steel, 4140 steel, and Ti-6Al-4V. In both 9310 and 4140 steel, the distribution of carbides throughout the microstructure a ected the ability of the material to dynamically recrystallize and determined the size of the dynamically recrystallized grains. Processing the materials at lower temperatures and higher strain rates resulted in ner dynamically recrystallized grains. Microstructural process models that can be used to estimate the resulting microstructure based on the processing parameters were developed for both 9310 and 4140 steel. Heat treatment studies performed on 9310 steel showed that the sub-micron grain size obtained during deformation could not be retained due to the low equilibrium volume fraction of carbides. Commercially available aluminum alloys were investigated to explain their high strain rate deformation behavior. Alloys such as 2139, 2519, 5083, and 7039 exhibit strain softening after an ultimate strength is reached, followed by a rapid degradation of mechanical properties after a critical strain level has been reached. Microstructural analysis showed that the formation of shear bands typically preceded this rapid degradation in properties. Shear band boundary misorientations increased as a function of equivalent strain in all cases. Precipitation behavior was found to greatly in uence the microstructural response of the alloys. Additionally, precipitation strengthened alloys were found to exhibit similar ow stress behavior, whereas solid solution strengthened alloys exhibited lower ow stresses but higher ductility during dynamic loading. Schmid factor maps demonstrated that shear band formation behavior was in uenced by texturing in these alloys.
Ph.D. in Materials Science and Engineering, May 2015
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Title: PHASE EQUILIBRIA AND THERMODYNAMIC MEASUREMENTS OF SOME HEUSLER COMPOUNDS
Creator: Chen, Song
Date: 2012-08-14, 2012-07
Description: Heusler alloys are compounds based on the original Heusler phase Cu2MnAl which are ternary intermetallics with a particular chemical...
Show moreHeusler alloys are compounds based on the original Heusler phase Cu2MnAl which are ternary intermetallics with a particular chemical stoichiometric formula X2YZ and face-centered cubic structure. Heusler alloys are of interest because of a range of physical phenomena which may occur in them that can be applied in mechanical or electronic devices, including shape memory property and disorder/order phenomenon. In this work, a high temperature drop calorimeters and Setaram calorimeters were used to obtain the enthalpy of formation and heat capacity of compounds in the Mn-based Heusler compounds (X2MnZ). Lattice parameters of these compounds were determined with XRD, and phase equilibria in these alloy system were studied in this work. Phase transformations were studied with DSC and dilatometry. The work is aimed at populating databases for computational thermodynamics, developing an understanding of alloying and clarifying phase equilibria.
M.S. in Material Science and Engineering, July 2012
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Title: THERMODYNAMIC PROPERTIES AND PHASE EQUILIBRIA OF SELECTED HEUSLER COMPOUNDS
Creator: Yin, Ming
Date: 2015, 2015-12
Description: Heusler compounds are ternary intermetallics with many promising properties such as spin polarization and magnetic shape memory effect. A...
Show moreHeusler compounds are ternary intermetallics with many promising properties such as spin polarization and magnetic shape memory effect. A better understanding of their thermodynamic properties facilitates future design and development. Therefore, standard enthalpies of formation and heat capacities from room temperature to 1500 K of selected Heusler compounds X2YZ (X = Co, Fe, Ni, Pd, Rh, Ru; Y = Co, Cu, Fe, Hf, Mn, Ni, Ti, V, Zr; Z = Al, Ga, In, Si, Ge, Sn) and half-Heusler compounds XYSn (X = Au, Co, Fe, Ir, Ni, Pd, Pt, Rh; Y = Hf, Mn, Ti, Zr) were measured using high temperature direct reaction calorimetry. The measured standard enthalpies of formation were compared with those predicted from ab initio calculations and the extended semiempirical Miedema's model. Trends in standard enthalpy of formation with respect to the periodic classification of elements were discussed. The effect of a fourth element (Co, Cu, Fe, Pd; Ti, V; Al, Ga, In, Si, Ge) on the standard enthalpy of formation of Ni2MnSn was also investigated. Lattice parameters of the compounds with an L21 structure were determined using X-ray powder diffraction analysis. Differential scanning calorimetry was used to determine melting points and phase transformation temperatures. Phase relationships were investigated using scanning electron microscopy with an energy dispersive spectrometer. The isothermal section of the Fe-Sn-Ti ternary system at 873 K was established using equilibrated alloys. Three ternary compounds including the Heusler compound Fe2SnTi were observed. A new ternary compound Fe5Sn9Ti6 was reported and the crystal structure of FeSnTi2 was determined for the first time.
Ph.D. in Mechanical, Materials and Aerospace Engineering
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Title: DEVELOPMENT OF A HIGH ANGULAR RESOLUTION DIFFUSION IMAGING TEMPLATE AND PROBABILISTIC CONNECTIVITY-BASED ATLAS OF THE HUMAN BRAIN
Creator: Varentsova, Anna
Date: 2016, 2016-05
Description: Digital human brain atlases consisting of MRI-based templates and semantic labels delineating different brain regions serve a critical role in...
Show moreDigital human brain atlases consisting of MRI-based templates and semantic labels delineating different brain regions serve a critical role in neuroimaging, mainly facilitating spatial normalization and automated segmentation for the purposes of voxel-wise, region-of-interest, and network analyses. Diffusion MRI templates contain rich information about the microstructure of the brain, however the accuracy of templates constructed based on the diffusion tensor imaging (DTI) model is limited in regions with complex neuronal microarchitecture. High angular resolution diffusion imaging (HARDI) overcomes limitations of the DTI model and is capable of resolving intravoxel heterogeneity. In this work a method to develop artifact-free HARDI template of the human brain from low angular resolution data is presented. Existing white matter (WM) atlases have been generated either based on anatomical landmarks, thus mixing tracts with substantially different roles, or using DTI tractography, which fails in regions with crossing fibers. Connectivity-based atlases developed using HARDI templates and probabilistic tractography have potential to identify functionally distinct subregions of the brain. This work presents connectivity-based atlas of human brain WM created using HARDI template in ICBM-152 space and a set of FreeSurfer grey matter labels.
Ph.D. in Physics, May 2016
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Title: Screech Tones of Supersonic Jets from Bevelled Rectangular Nozzles
Creator: Tam, Ckw, Shen, H., Raman, G.
Date: 1997-07
Publisher: American Inst Aeronaut Astronaut
Description: It is known experimentally that an imperfectly expanded rectangular jet from a thin-lip convergent nozzle emits only a single dominant screech...
Show moreIt is known experimentally that an imperfectly expanded rectangular jet from a thin-lip convergent nozzle emits only a single dominant screech tone. The frequency of the screech tone decreases continuously with an increase in jet Mach number. However, for a supersonic jet issued from a bevelled nozzle or a convergent-divergent nozzle with straight side walls, the shock cell structure and the screech frequency pattern are fairly complicated and have not been predicted before. It is shown that the shock cell structures of these jets can be decomposed into waveguide modes of the jet flow. The screech frequencies are related to the higher-order waveguide modes following the weakest link screech tone theory. The measured screech frequencies are found to compare web with the predicted screech frequency curves.
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Title: Fab Lab: Creating Design-to-Prototype Learning Modules at the Museum of Science and Industry (sequence unknown), IPRO 333 - Deliverables: IPRO 333 Midterm Presentation F09
Creator: Bonesz, Andrew, Clark, Howard, Douglas, Carlie, Gajdorus, Michael, Gottschall, Keenan, Hendricks, Rachel, Kimball, Clayton, Linares, Jared, Marks, Paul, Mellom, James, Oblenida, Cindy, Pop, Sabina, Stelcel, Carl, Young, Jeremy, Zhou, Raymond
Date: 2009-12
Description: The primary objective of IPRO 333 is to partner the knowledge and ideas of young engineers, architects, and scientists at IIT with the...
Show moreThe primary objective of IPRO 333 is to partner the knowledge and ideas of young engineers, architects, and scientists at IIT with the resources of the Museum of Science and Industry (MSI) in Chicago. This partnership endeavors to help the museum's Fabrication Laboratory (Fab Lab) maximize its potential as a resource for museum guests, young and old, as well as for IIT students, staff, and faculty.
Sponsorship: Museum of Science and Industry. Steven Willis- Director, Fabrication Lab
Deliverables for IPRO 333: Fab Lab: Creating Design-to-Prototype Learning Modules at the Museum of Science and Industry for the fall 2009 semester
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Title: Gerry-meandering: An Assessment of the Congressional District Model of Depository Allocation (preprint): AhrensGriffinedrev2
Creator: Ahrens, Aric G., Griffin, Luke A.
Date: 2003-06
Description: The preprint of a published article dealing with the effect of allocating Federal Depositories by Congressional district. Conclusions drawn...
Show moreThe preprint of a published article dealing with the effect of allocating Federal Depositories by Congressional district. Conclusions drawn include the fact that due to redistricting that occurs after each decennial census, over time some districts may have within their boundaries a greater number than the two depositories that Congressional district allocation was intended to produce. Likewise, over time shifting boundaries of districts have created districts that have no depositories whatsoever.
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Title: EXPERIMENTAL STUDY, TIME-RESOLVED OBSERVATION, AND ANALYSIS OF NANOSECOND LASER ABLATION AND LASER-INDUCED PLASMA
Creator: Zhou, Yun
Date: 2013, 2013-05
Description: For lasers, there exist many current and potential competitive applications in the areas of manufacturing, materials processing, and so on....
Show moreFor lasers, there exist many current and potential competitive applications in the areas of manufacturing, materials processing, and so on. Nanosecond (ns)-pulsed lasers are often seen in these applications. This dissertation presents the experimental study, time-resolved observation and analysis of nanosecond laser ablation and laser-induced plasma due to ablation, and the analysis is based on physics-based numerical models. Specifically, the following topics have been studied: (1). Plasma induced by ablation using long-duration nanosecond laser pulse Plasma is often produced in laser-material interactions, and may play an important role in many laser-based or laser-assisted technologies, such as laser shock peening (LSP), laser micromachining (through the laser ablation process), laser-induced breakdown spectroscopy (LIBS), and laser propulsion, etc. However, despite the previous work in the literature, the study is still limited for the plasma induced by the ablation process using long nanosecond laser pulses (with durations on the order of ~100 ns). In this dissertation, investigations have been performed on this kind of plasma through fast photography (imaging) and emission spectroscopy techniques, and the experimental results have been analyzed using physics-based computational models. Based on the investigations, the following major interesting findings have been obtained under the investigated conditions: (i) Two high radiation intensity regions are observed in the plasma, and one of them disappears soon after laser pulse ends. The research work shows that this phenomenon is related to the vaporization process from the target surface and the confinement effect of the ambient air. (ii) Laser-induced plasma xvii backward growth phenomenon occurs for target ablation using 100-ns laser pulses, but not for that using 200-ns pulses. The investigation shows that the underlying mechanism is the backward growth of the boundary of the high temperature region without actual backward motion of vapor material. (iii) Under the studied conditions, the core region of the plasma (~100 μm above the laser-ablated target) has relatively low temperatures as compared to some other regions of the plasma, which contradicts the common intuition. (2). Semiconductor ablation utilizing infrared (IR) nanosecond laser pulses Semiconductor micromachining through laser ablation may have the advantages of high spatial resolution, high processing efficiency, good flexibility, and no tool wear. However, most of the prior investigations in the literature on ns laser ablation of semiconductors often employ lasers at the ultraviolet (UV) or visible wavelength. The work using IR ns lasers is limited, but IR ns lasers may often have lower cost and require less external energy consumption to produce the same average laser power output. In this dissertation, the ablation of semiconductors using IR ns lasers has been studied through time-resolved observations (fast photography) and the results have been analyzed utilizing physics-based numerical models. The research work shows that the ablation mechanism under the studied conditions is the surface vaporization process during the early stage followed by the subsequent liquid ejection process that occurs at a later time. The research work and analysis shows that the underlying mechanism for the observed liquid ejection should be due to the spatial gradient of the pressure exerted on the target surface, instead of phase explosion. (3). Laser-induced backside ablation (LIBA) of sapphire with IR ns laser pulses xviii LIBA may potentially provide a good solution for high-quality and highefficiency micromachining of wide-band-gap dielectrics (WBGD). However, the prior work on LIBA of sapphire (which is a very important WBGD material) using low-cost IR ns lasers has been rarely reported. This kind of work has been carried out in this dissertation, and the investigation shows that under the studied conditions LIBA can produce very high material removal efficiency and reasonably good quality of machining without obvious chemical contamination coming from the employed backing layer. The ablation rate and damage threshold are measured under different laser parameters, and the research work may provide useful information for the applications of LIBA in practical areas using IR ns lasers that may often have relatively lower cost than UV or visible ns lasers.
PH.D in Mechanical and Aerospace Engineering, May 2013
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Title: The yield of acetic acid as influenced by temperature in wood distillation
Creator: Marx, Walter L.
Date: 2009, 1913
Publisher: Armour Institute of Technology
Description: http://www.archive.org/details/yieldofaceticaci00marx
Thesis (B.S.)--Armour Institute of Technology; Bibliography: leaf 22

Title: FIELD AND PHOTO-EMISSION IN A SHORT-PULSE, HIGH-CHARGE CESIUM TELLURIDE RF PHOTOINJECTOR
Creator: Wisniewski, Eric E.
Date: 2014, 2014-05
Description: A new high-charge RF gun is now operating at the Argonne Wakefield Accelerator (AWA) facility at Argonne National Laboratory (ANL). The 1.5...
Show moreA new high-charge RF gun is now operating at the Argonne Wakefield Accelerator (AWA) facility at Argonne National Laboratory (ANL). The 1.5 cell 1.3 GHz gun uses a Cesium telluride photocathode driven with a 248 nm laser to provide short-pulse, high charge electron beams for the new 75 MeV drive beamline. The high-gradient RF gun (peak field on the cathode > 80MV/m) is a key piece of the facility upgrade. The large Cs2Te photocathode (diameter > 30 mm) was fabricated in-house. The photo-injector will be used to generate high-charge, short pulse, single bunches (Q > 100 nC) and bunch-trains (Q>1000 nC) for wakefield experiments, typically involving dielectric-loaded accelerating structures. Details of the photocathode fabrication process and the results of associated diagnostic measurements are presented, including QE measurements and work function measurements performed with a Kelvin probe. Field-emitted dark current from the Cs2Te cathode was measured during RF conditioning and characterized. Fowler-Nordheim plots of the data are presented and compared to similar measurements made using a copper cathode in the initial phase of conditioning. The results for cesium telluride exhibited non-linear regions within the Fowler-Nordheim plots similar to previous experimental results for other p-type semiconductors. Results of quantum efficiency (QE) studies are presented with the cathode operating in both single and bunch-train modes. QE uniformity and lifetime studies are presented. During commissioning, the cesium telluride photocathode produced bunch-charge of 100 nC, breaking the previous record. No evidence of bunch-train position-dependence of QE was found when generating four-bunch trains with total charge up to 200 nC.
PH.D in Physics, May 2014
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Title: SAFETY TRAINING IN CONSTRUCTION
Creator: Demirkesen, Sevilay
Date: 2011-11-29, 2011-12
Description: The construction industry is one of the most hazardous industries. Therefore, the ways to reduce the number of risks have been a concern for...
Show moreThe construction industry is one of the most hazardous industries. Therefore, the ways to reduce the number of risks have been a concern for construction companies. Safety training is considered as one of the most efficient ways of improving safety record. Therefore, this study aimed to describe the best safety training methods and the most efficient organization in safety training. The study also aimed to show how to take best safety measures to protect construction workers. In this thesis study, a questionnaire was conducted in order to investigate the achievement of safety learning, challenges in a safety training program and the methods of improving safety record. Thus, the questionnaire was e-mailed to 400 contractors in US. The data collected also indicated the importance of safety training in companies’ success in the industry. Additionally, this study presents recommendations on how companies could improve their safety record.
M.S. in Civil Engineering, December 2011
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Title: IN VITRO ASSAYS FOR ASSESSING THE IMPACT OF PROCESSING ON THE ALLERGENIC POTENTIAL OF MILK ALLERGENS
Creator: Zhao, Yuhui
Date: 2014, 2014-07
Description: A better understanding of how processing may affect the allergenicity of proteins will allow a more accurate allergen risk assessment and...
Show moreA better understanding of how processing may affect the allergenicity of proteins will allow a more accurate allergen risk assessment and achieve a greater success in food allergy management. To determine whether food processing can affect the allergenic potential of proteins, immunochemical methods are commonly used, however, these methods are not able to determine changes in the proteins’ ability to elicit allergic reactions. Although food challenge studies are the gold standard for determining the allergenicity of proteins, such studies are seldom performed due to ethical reasons and the difficulty in recruiting a sufficient number of study participants. In recent years, a number of mediator release assays have been developed to measure the allergenic potential of food proteins in vitro. How these cell-based assays can be used to assess the impact of thermal or other processing conditions on the allergenic potential of proteins remains to be determined. This study evaluated the use of sensitized rat basophilic leukemia (RBL) cells for assessing the impact of boiling on the allergenic potential of milk allergens by measuring changes in the proteins’ ability to induce cell degranulation and the release of β-hexosaminidase. RBL-2H3 cells sensitized with rat IgEs that were specifically raised against NIST non-fat milk standard reference material, β-lactoglobulin (BLG), α-lactalbumin (ALA) and α-casein (αCAS) were challenged with various concentrations of each allergen in its native and processed (boiled in PBS for 10 min) forms. Cell degranulation caused by the allergen was monitored by measuring the release of β-hexosaminidase. All allergens (NIST milk, BLG, ALA, and αCAS) were able to induce the release of β-hexosaminidase, up to 43.1%. A decrease in % release of β-hexosaminidase was observed when cells were challenged with a decreasing concenration xi of the ALA and milk allergens. Boiling of nonfat milk, ALA, BLG and αCAS caused an increase in the % release of β-hexosaminidase from sensitized cells across antigen concentrations from 10-6 mg/mL to 1 mg/mL. In conclusion, this study demonstrated that the in vitro mediator release assay method may serve as a useful model to evaluate the impact of thermal processing on the allergenic potential of milk allergens.
M.S. in Food Safety and Technology, July 2014
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Title: BIOLOGICAL STRATEGIES FOR ENHANCEMENT OF LIQUID FUELS: SULFUR REMOVAL FROM PETROLEUM AND BIOETHANOL PRODUCTION
Creator: Wang, Jia
Date: 2013, 2013-12
Description: Rhodococcus baikonurensis CW25 was transformed with the Rhodococcus erythropolis strain IGTS8 desulfurization operon (dszABC, which encodes...
Show moreRhodococcus baikonurensis CW25 was transformed with the Rhodococcus erythropolis strain IGTS8 desulfurization operon (dszABC, which encodes the enzymes of the “4S” desulfurization pathway) or this operon modified to contain a synthetic cysteine-methionine rich “sulpeptide” gene (S1) (dszAS1BC). The two CW25 derivatives were subjected to directed evolution to select faster growing cells using the key 4S pathway substrate dibenzothiophene (DBT) as the sole source of sulfur. Data of cell doubling times verified the success of selection of cultures with increasingly rapid growth. The desulfurization activities of resting cells of early passages demonstrated improvements, and the highest activity of the dszAS1BC-bearing CW25 derivative was 115% higher than that of the CW25 derivative without S1. In addition, a trend of initial high activity was followed by a decrease in subsequent passages. Rates of DBT metabolism of growing cells demonstrated a different trend, probably because the activity of growing cells concurrently reflects the activity of DszABC enzymes and the growth rates of the recombinants. Dry cell weights fluctuated during the evolution process, probably because of variations in the efficiency of the conversion of the sulfur in DBT into sulfite, then into sulfate or biomass, or, for the S1-bearing cells, because the secretion of the S1 peptide from cells might have variable efficiency. A mixed culture of two Paenibacillus species (“W” and “Y”) was isolated that can metabolize DBT at temperatures up to 54 ºC. Strain Y is the only one of the two with desulfurization activity, while strain W enhances the desulfurization ability of Y. The W-Y culture may be a useful starting point for selection of desulfurization cultures with even greater thermal stability. xiii Ethanologenic Escherichia coli strain FBR5 was compared with Vitreoscilla hemoglobin (VHb)-expressing FBR5 (TS3) regarding the concentrations of ATP, NAD+, NADH, NAD+/NADH ratio; and growth and ethanol production at various points during growth. The significant finding was that the NAD+/NADH ratio for TS3 was lower in early growth, but higher in later growth compared to that for FBR5. This is probably because more NADH was required by TS3 for its enhanced ethanol production and VHb-related increased respiration under microaeration conditions.
PH.D in Biology, December 2013
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Title: Gerry-meandering: An Assessment of the Congressional District Model of Depository Allocation (preprint)
Creator: Ahrens, Aric G., Griffin, Luke A.
Date: 2003-06
Description: The preprint of a published article dealing with the effect of allocating Federal Depositories by Congressional district. Conclusions drawn...
Show moreThe preprint of a published article dealing with the effect of allocating Federal Depositories by Congressional district. Conclusions drawn include the fact that due to redistricting that occurs after each decennial census, over time some districts may have within their boundaries a greater number than the two depositories that Congressional district allocation was intended to produce. Likewise, over time shifting boundaries of districts have created districts that have no depositories whatsoever.
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Title: Planning for Human Implantation of a Cortical Visual Prosthesis (sequence unknown), IPRO 334 - Deliverables: IPRO 334 IPRO Day Presentation F09
Creator: Bern, David, Chen, Shanyl, Deroo, Mary, Gorski, David, Kelly, Thomas, Leasenby, Alex, Li, Zhi, Pyrkh, Hanna, Subhani, Maham, Taneja, Aanchal
Date: 2009-12
Description: The Intracortical Visual Prosthesis is based upon that concept that by implanting a large number of subminiature electrodes within the human...
Show moreThe Intracortical Visual Prosthesis is based upon that concept that by implanting a large number of subminiature electrodes within the human visual cortex, coordinated temporal-spatial image information can be artificially communicated to the human visual cortex in the form of electrical currents, acting as a sensory substitute for normal vision.
Sponsorship: IIT Laboratory of Neural Prosthetic Research
Deliverables for IPRO 334: Planning for Human Implantation of a Cortical Visual Prosthesis for the fall 2009 semester
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Title: MATHEMATICAL MODELING OF POLY(ETHYLENE GLYCOL) DIACRYLATE HYDROGEL SYNTHESIS VIA VISIBLE LIGHT FREE-RADICAL PHOTOPOLYMERIZATION FOR TISSUE ENGINEERING APPLICATIONS
Creator: Lee, Chu-yi
Date: 2013, 2013-05
Description: Crosslinked hydrogels of poly(ethylene glycol) diacrylate (PEGDA) have been extensively used as scaffolds for applications in tissue...
Show moreCrosslinked hydrogels of poly(ethylene glycol) diacrylate (PEGDA) have been extensively used as scaffolds for applications in tissue engineering. In this thesis, PEGDA hydrogels are synthesized using visible light free-radical photopolymeriza- tion (λ = 514 nm) in the presence of the visible light photosensitive dye, EosinY, the co-initiator, triethanolamine (TEA), a comonomer, N-vinyl pyrrolidone (NVP), a crosslinking agent, PEGDA, and an optional PEG monoacrylate monomer that contains the cell adhesive ligand YRGDS. The incorporation level of the YRGDS lig- and as well as the physical and mechanical properties of these hydrogels dictate cell behavior and tissue regeneration. These hydrogel properties may be tuned through variations in polymerization conditions. The goal of this thesis was to develop a math- ematical model for PEGDA hydrogel formation which predicts the incorporation level of YRGDS and the crosslink density of hydrogel as a variety of polymerization con- ditions. This model provides insight into the process of hydrogel crosslinking and in effectively guiding the experimental design of these scaffolds for tissue engineering applications. To accomplish this task two major components comprised the studies of this thesis. The first component involved an investigation of the visible light photo- initiation mechanism of EosinY and TEA, and the second component involved the develop of a hydrogel synthesis model and its validation. Experiments and modeling were used to determine an expression for the rate of initiation of the EosinY/TEA initiation system and to propose a photoinitiation mechanism. In Chapter 2, exper- imental data and parameter fitting were utilized to obtain an empirical expression for the rate of initiation. However, this empirical expression did not consider the ef- fect of inhomogeneous light distribution which is present in this experimental system. The dynamics of light absorption during polymerization were measured under differ- xiv ent conditions in order to gain insight into the kinetic photoinitiation mechanism as well as the rate of initiation. In Chapter 3, a mechanism for this photo-initiation was proposed. Using this mechanism the light absorption dynamics accounting for inhomogeneous light distribution were simulated which were found to be in an agree- ment with the light absorption measurements shown in Chapter 2. Further validation of this proposed mechanism was achieved from polyNVP conversion measurements. This photo-initiation mechanism was implemented in the hydrogel model. In Chapter 4, the hydrogel synthesis model was developed based on the kinetic approach of the method of moments combined with the Numerical Fractionation technique. The model was used to predict the dynamics of hydrogel properties such as gel fraction, crosslink density, and RGD incorporation under various polymerization conditions. Model predictions were compared with experimental data. Three sets of experiments were conducted. In the first set of experiments where hydrogels were formed in the absence of Acryl-PEG-RGD, the total double bond concentration was kept constant while varying the compositions of NVP and PEGDA. The model and the experiments showed a maximum crosslink density for an acrylate to double bond ratio of 0.5 to 0.6. This is related to the synergistic cross-propagation between NVP and PEGDA, which results in an increase in the rate of polymerization leading to higher crosslink density. In the second set of experiments, hydrogels were formed in the presence of Acryl-PEG-RGD to investigate its incorporation as well as the hydrogel crosslink density. The model showed reasonable agreement with the experimental data and in some cases the predicted RGD deviated from the experimental measurements due to changes in volume upon swelling. The effect of swelling was not considered by the model. The calculated crosslink densities were compared with the inverse swelling ratios from the experiments. The reduction of free volume due to the space occupied xv by the unreacted pendant double bonds was not considered by the model. This reduc- tion of free volume affected the apparent swelling ratio obtained from experiments thus resulting in the observed mismatch between the experimental trends and the predicted crosslink density by the model. In the third set of experiments, additional crosslink density measurements were conducted using a PEGDA macromer of lower molecular weight (MW = 575 Da.). The experiments were performed in the absence of Acryl-PEG-RGD. Few cases were not accurately predicted since the model did not consider the reduction in the concentration of available pendant double bonds when gelation occurs. Among the three set of experiments, the hydrogel synthesis model offers reasonable predictions for most of the experimental cases. This model can be used as a guide for experimen- tally designing PEGDA hydrogels with the desired properties for tissue engineering applications.
PH.D in Chemical and Biological Engineering, May 2013
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