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DEFORMABLE MESH MODEL OF CARDIAC MOTION FROM MRI DATA
Title
DEFORMABLE MESH MODEL OF CARDIAC MOTION FROM MRI DATA
Creator
Parages, Felipe M.
Date
2011-04-25, 2011-05
Description
Estimation of myocardial motion from medical images is an important problem in several fields such as computer-aided diagnosis of cardiac...
Show moreEstimation of myocardial motion from medical images is an important problem in several fields such as computer-aided diagnosis of cardiac lesions, development of cardiac simulators, and cardiac image processing in general. Tagged Magnetic Resonance Imaging (tagged MRI) is an image modality in which magnetic markers (taglines) track true deformation of heart tissue, thus being a valuable tool to analyze cardiac motion. Although several methods to analyze cardiac motion from tagged MRI have been proposed in the past, many of them rely somewhat on manual intervention to correct loss of tagline contrast towards the end of the cardiac cycle. Likewise, some of these methods are based on tagged MRI only, failing to include motion information from untagged (cine) gated cardiac MRI. We present in this thesis a model that overcomes these limitations by using a regularized non-rigid Deformable Mesh Model (DMM) to track pixel-intensity variations over combined datasets of gated tagged and cine MRI. DMM performs motion estimation directly over MRI pixel intensities, and proved to achieve motion analysis results comparable to other methods in which manual fine-tuning of tagline tracking is required. In addition, incorporating information from gated cine MRI into DMM proves to be helpful into capturing cardiac motion more efficiently. Finally, we show in this work the capacity of DMM to accurately estimate geometric and mechanical properties of the myocardium, such as strain and ejection fraction. We conclude that DMM method has a great potential for cardiac motion modeling, and may constitute a good alternative to other techniques in the future.
M.S. in Electrical Engineering, May 2011
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EVALUATION OF COMPUTER ALGORITHMS FOR THE ANALYSIS AND RECONSTRUCTION OF CARDIAC IMAGES
Title
EVALUATION OF COMPUTER ALGORITHMS FOR THE ANALYSIS AND RECONSTRUCTION OF CARDIAC IMAGES
Creator
Parages, Felipe M.
Date
2017, 2017-05
Description
In the medical imaging field, image processing algorithms must be evaluated by measuring performance at some clinically-relevant task of...
Show moreIn the medical imaging field, image processing algorithms must be evaluated by measuring performance at some clinically-relevant task of interest (i.e. task-based quality assessment). This dissertation relies on the task-based paradigm to evaluate motion-estimation and image-reconstruction methods, respectively, for two cardiac-imaging modalities, namely: cardiac-gated tagged Magnetic Resonance Imaging (MRI), and Single Photon Emission Computerized Tomography for Myocardial Perfusion Imaging (SPECT-MPI). First, a task-based approach is followed to evaluate three motion-estimation methods for clinical cardiac-gated tagged MRI, namely: non-rigid registration using a Deformable Mesh Model (DMM), Strain from Unwrapped Harmonic Phase (SUPHARP), and Feature-Based (FB) algorithms. More specifically, the goal is to quantify and rank their performances at both detection and estimation tasks. For detection, methods are evaluated per their ability to discern between normal and abnormal motion patterns in known cardiomyopathies (e.g. hypertension and mitral regurgitation). For estimation tasks, methods are evaluated per their accuracy at estimating several rotation/twist and strain features of clinical interest; since true values for these features are generally unknown, a statistical Regression Without Truth (RWT) model is adopted, which does not assume the existence of a “gold-standard” method to use as a ground-truth reference. Moreover, the RWT model provides with an objective figure-of-merit that allows ranking methods in absolute fashion. Second, a novel anthropomorphic Model Observer (MO) is proposed for optimization of SPECT-MPI reconstruction algorithms such as Filtered Back-projection (FBP) and Ordered-subsets Expectation Maximization (OSEM). MOs are computer models that aim to mimic the performance of human readers (typically radiologists) at some clinically relevant task of interest. The proposed MO is based on supervised machine-learning classification, for the diagnostic tasks of detection, localization and assessment of perfusion defects. The MO is trained using an ensemble of synthetic cases whose perfusion were scored (i.e. labeled) by human specialists. The trained MO is subsequently applied on images not read by humans (both synthetic and clinical), aiming to predict their diagnostic scores. Results show that the proposed MO accurately predicts human diagnostic performances. Furthermore, it generalizes well to new images not used during training, not only from different reconstruction algorithms, but also from synthetic to clinical cases.
Ph.D. in Electrical and Computer Engineering, May 2017
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